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  5. PSME_00010771-RA

PSME_00010771-RA


Description : (at1g42540 : 809.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.3 (GLR3.3); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.6 (TAIR:AT3G51480.1); Has 6567 Blast hits to 6430 proteins in 489 species: Archae - 28; Bacteria - 758; Metazoa - 4571; Fungi - 0; Plants - 644; Viruses - 2; Other Eukaryotes - 564 (source: NCBI BLink). & (q7xp59|glr31_orysa : 766.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 1618.0) & (original description: no original description)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010771-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
At2g17260 No alias glutamate receptor 2 [Source:TAIR;Acc:AT2G17260] 0.02 Orthogroups_2024-Update
At2g24710 No alias glutamate receptor 2.3 [Source:TAIR;Acc:AT2G24710] 0.03 Orthogroups_2024-Update
At5g11180 No alias Glutamate receptor 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN8] 0.04 Orthogroups_2024-Update
At5g27100 No alias Glutamate receptor 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O04660] 0.03 Orthogroups_2024-Update
At5g48400 No alias Glutamate receptor 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV72] 0.05 Orthogroups_2024-Update
At5g48410 No alias Glutamate receptor 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH75] 0.03 Orthogroups_2024-Update
Bradi4g30840 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Bradi4g30850 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Bradi4g30860 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Bradi4g30880 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Brara.B00398.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.F03008.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Brara.G00725.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.J00340.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Glyma.06G233600 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Glyma.09G197100 No alias glutamate receptor 3.6 0.04 Orthogroups_2024-Update
Glyma.09G197400 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
Glyma.11G087100 No alias glutamate receptor 3.6 0.02 Orthogroups_2024-Update
Glyma.13G093266 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Glyma.13G165100 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
Glyma.13G233400 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Glyma.13G272400 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Glyma.13G308400 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
HORVU2Hr1G045730.11 No alias ligand-gated cation channel *(GLR) 0.05 Orthogroups_2024-Update
HORVU5Hr1G010420.23 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
HORVU7Hr1G031400.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
LOC_Os06g06130 No alias glutamate receptor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426811g0010 No alias (at1g05200 : 243.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
MA_10430853g0010 No alias (at1g42540 : 532.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
MA_16378g0010 No alias (at2g32390 : 296.0) Encodes a ionotropic glutamate... 0.04 Orthogroups_2024-Update
PSME_00000830-RA No alias (at2g29100 : 521.0) member of Putative ligand-gated ion... 0.05 Orthogroups_2024-Update
PSME_00001098-RA No alias (at2g29120 : 637.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00001291-RA No alias (at4g35290 : 534.0) Encodes a putative glutamate... 0.06 Orthogroups_2024-Update
PSME_00001292-RA No alias (at4g35290 : 567.0) Encodes a putative glutamate... 0.06 Orthogroups_2024-Update
PSME_00005234-RA No alias (at1g05200 : 189.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00007782-RA No alias (at2g17260 : 247.0) Encodes a glutamate receptor.... 0.03 Orthogroups_2024-Update
PSME_00009648-RA No alias (at4g35290 : 566.0) Encodes a putative glutamate... 0.03 Orthogroups_2024-Update
PSME_00009649-RA No alias (at4g35290 : 475.0) Encodes a putative glutamate... 0.04 Orthogroups_2024-Update
PSME_00021963-RA No alias (at1g05200 : 294.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00027643-RA No alias (at2g29120 : 565.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00027644-RA No alias (at2g29120 : 490.0) member of Putative ligand-gated ion... 0.01 Orthogroups_2024-Update
PSME_00028974-RA No alias (at2g29120 : 387.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00032127-RA No alias (at4g35290 : 436.0) Encodes a putative glutamate... 0.04 Orthogroups_2024-Update
Potri.001G374300 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Potri.006G172100 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Potri.006G269100 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Potri.018G010400 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Potri.018G010800 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Seita.1G009400.1 No alias ligand-gated cation channel *(GLR) 0.01 Orthogroups_2024-Update
Sobic.002G208301.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.06 Orthogroups_2024-Update
Sobic.002G209100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Solyc06g063200 No alias glutamate receptor-like 2.4 0.03 Orthogroups_2024-Update
Sopen05g026960 No alias Receptor family ligand binding region 0.03 Orthogroups_2024-Update
Sopen06g022620 No alias Receptor family ligand binding region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 505 835
IPR001828 ANF_lig-bd_rcpt 80 438
IPR001320 Iontro_rcpt 836 866
No external refs found!