1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00010774-RA

PSME_00010774-RA


Description : (at1g22640 : 190.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 189.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010774-RA
Cluster HCCA clusters: Cluster_731

Target Alias Description ECC score Gene Family Method Actions
A4A49_28985 No alias transcription repressor myb4 0.02 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.04 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.02 Orthogroups_2024-Update
At3g08500 No alias Transcription factor MYB83... 0.04 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.06 Orthogroups_2024-Update
Brara.E03613.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.07G189300 No alias MYB-like 102 0.05 Orthogroups_2024-Update
Glyma.13G063200 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.14G214500 No alias myb domain protein 43 0.04 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
HORVU6Hr1G073500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_139238g0010 No alias (at1g09540 : 266.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
MA_14061g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
MA_199974g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.07 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Potri.019G050900 No alias myb domain protein 9 0.04 Orthogroups_2024-Update
Seita.3G232500.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G280000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G138800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G016600.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc01g005660 No alias R2R3MYB transcription factor 5 0.02 Orthogroups_2024-Update
Solyc01g087130 No alias R2R3MYB transcription factor 47 0.04 Orthogroups_2024-Update
Solyc02g089190 No alias R2R3MYB transcription factor 29 0.02 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 115 162
IPR001005 SANT/Myb 168 212
IPR001005 SANT/Myb 13 59
No external refs found!