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  5. PSME_00010776-RA

PSME_00010776-RA


Description : (at1g22640 : 177.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20026|myb1_horvu : 161.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010776-RA
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_12677 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.02 Orthogroups_2024-Update
At4g28110 No alias MYB41 [Source:UniProtKB/TrEMBL;Acc:A0A178V452] 0.03 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.04 Orthogroups_2024-Update
At5g59780 No alias Transcription factor MYB59... 0.02 Orthogroups_2024-Update
At5g65790 No alias At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538] 0.05 Orthogroups_2024-Update
Bradi1g20540 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Bradi2g36730 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Bradi2g47590 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
Bradi2g48521 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.08 Orthogroups_2024-Update
Bradi3g18977 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Bradi3g48886 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
Bradi3g52260 No alias myb domain protein 58 0.05 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Brara.A03854.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.04 Orthogroups_2024-Update
Brara.B00350.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03072.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G167088 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
Glyma.02G006800 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Glyma.02G247100 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.04 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Glyma.09G032100 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Glyma.12G104500 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Glyma.13G038100 No alias myb domain protein 57 0.02 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.05 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g19970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g65370 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g39470 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g42950 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g04820 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10048467g0010 No alias (at5g35550 : 171.0) TT2 encodes a R2R3 MYB domain... 0.04 Orthogroups_2024-Update
MA_10157944g0010 No alias (p20026|myb1_horvu : 261.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_137934g0010 No alias (at3g23250 : 215.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_23242g0010 No alias (at1g22640 : 201.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00002485-RA No alias (at3g61250 : 260.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00013410-RA No alias (at5g35550 : 181.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00044287-RA No alias (at4g05100 : 216.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051403-RA No alias (at1g22640 : 162.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.02 Orthogroups_2024-Update
Potri.T011400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s257_83V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s317_55V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.03 Orthogroups_2024-Update
Seita.6G190300.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G179800.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Seita.9G384800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G034500.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G142300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G303400.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Sobic.006G030200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G055800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.02 Orthogroups_2024-Update
Solyc08g005870 No alias R2R3MYB transcription factor 8 0.03 Orthogroups_2024-Update
Solyc10g044680 No alias R2R3MYB transcription factor 55 0.07 Orthogroups_2024-Update
Solyc12g099140 No alias R2R3MYB transcription factor 45 0.03 Orthogroups_2024-Update
Sopen01g004560 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen02g016880 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!