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  5. PSME_00010841-RA

PSME_00010841-RA


Description : (at2g20780 : 525.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 5 (TAIR:AT3G18830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41144|stc_ricco : 196.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1050.0) & (original description: no original description)


Gene families : OG_42_0000406 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010841-RA
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
96814 No alias polyol/monosaccharide transporter 5 0.04 Orthogroups_2024-Update
97702 No alias polyol/monosaccharide transporter 1 0.04 Orthogroups_2024-Update
Bradi1g23450 No alias polyol/monosaccharide transporter 5 0.04 Orthogroups_2024-Update
Brara.A02904.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
GRMZM2G039580 No alias polyol/monosaccharide transporter 5 0.03 Orthogroups_2024-Update
GRMZM2G064437 No alias polyol/monosaccharide transporter 5 0.03 Orthogroups_2024-Update
GRMZM2G066820 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G301885 No alias polyol/monosaccharide transporter 5 0.03 Orthogroups_2024-Update
Glyma.11G066000 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G066600 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G141000 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G036570.2 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
HORVU2Hr1G036590.4 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
HORVU4Hr1G010470.1 No alias polyol/monosaccharide transporter *(PLT) 0.04 Orthogroups_2024-Update
HORVU7Hr1G098820.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
LOC_Os03g10090 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_41476g0010 No alias (at2g20780 : 468.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00055463-RA No alias (at2g20780 : 528.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Seita.2G368800.1 No alias polyol/monosaccharide transporter *(PLT) 0.04 Orthogroups_2024-Update
Seita.3G014500.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
Seita.9G504800.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
Sobic.001G469500.1 No alias polyol/monosaccharide transporter *(PLT) 0.02 Orthogroups_2024-Update
Solyc01g109460 No alias Polyol monosaccharide transporter 4 0.03 Orthogroups_2024-Update
Sopen01g051650 No alias Sugar (and other) transporter 0.03 Orthogroups_2024-Update
Sopen02g013920 No alias Sugar (and other) transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 44 512
No external refs found!