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  5. PSME_00010903-RA

PSME_00010903-RA


Description : (q03684|bip4_tobac : 1051.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 1040.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (reliability: 2080.0) & (original description: no original description)


Gene families : OG_42_0000096 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010903-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
267815 No alias chloroplast heat shock protein 70-2 0.02 Orthogroups_2024-Update
440900 No alias Heat shock protein 70 (Hsp 70) family protein 0.03 Orthogroups_2024-Update
A4A49_19213 No alias heat shock cognate 70 kda protein 2 0.03 Orthogroups_2024-Update
A4A49_23212 No alias luminal-binding protein 0.03 Orthogroups_2024-Update
A4A49_65725 No alias luminal-binding protein 5 0.03 Orthogroups_2024-Update
AC209784.3_FG007 No alias heat shock protein 70 0.05 Orthogroups_2024-Update
At3g09440 No alias Heat shock protein 70 (Hsp 70) family protein... 0.07 Orthogroups_2024-Update
At3g12580 No alias Probable mediator of RNA polymerase II transcription... 0.03 Orthogroups_2024-Update
At5g02490 No alias Probable mediator of RNA polymerase II transcription... 0.05 Orthogroups_2024-Update
At5g02500 No alias Probable mediator of RNA polymerase II transcription... 0.02 Orthogroups_2024-Update
At5g28540 No alias Mediator of RNA polymerase II transcription subunit 37a... 0.04 Orthogroups_2024-Update
Bradi1g66590 No alias heat shock protein 70 0.04 Orthogroups_2024-Update
Bradi1g77637 No alias mitochondrial HSO70 2 0.04 Orthogroups_2024-Update
Bradi2g54570 No alias heat shock protein 70 0.04 Orthogroups_2024-Update
Bradi3g01477 No alias Heat shock protein 70 (Hsp 70) family protein 0.03 Orthogroups_2024-Update
Bradi4g33878 No alias mitochondrial HSO70 2 0.03 Orthogroups_2024-Update
Bradi4g39470 No alias chloroplast heat shock protein 70-2 0.02 Orthogroups_2024-Update
Brara.A02225.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A03331.1 No alias chaperone *(Hsp70) 0.03 Orthogroups_2024-Update
Brara.C01581.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01869.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01543.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K01505.1 No alias chaperone *(cpHsc70)) 0.03 Orthogroups_2024-Update
Cre02.g080700 No alias Heat shock protein 70 (Hsp 70) family protein 0.01 Orthogroups_2024-Update
Cre06.g250100 No alias chloroplast heat shock protein 70-2 0.01 Orthogroups_2024-Update
Cre08.g372100 No alias heat shock protein 70B 0.03 Orthogroups_2024-Update
GRMZM2G340251 No alias heat shock protein 70 0.03 Orthogroups_2024-Update
GRMZM2G415007 No alias Heat shock protein 70 (Hsp 70) family protein 0.03 Orthogroups_2024-Update
GRMZM2G428391 No alias heat shock protein 70 0.03 Orthogroups_2024-Update
GRMZM5G802801 No alias heat shock protein 70 0.02 Orthogroups_2024-Update
Glyma.03G171100 No alias heat shock cognate protein 70-1 0.09 Orthogroups_2024-Update
Glyma.05G219400 No alias Heat shock protein 70 (Hsp 70) family protein 0.06 Orthogroups_2024-Update
Glyma.05G219600 No alias Heat shock protein 70 (Hsp 70) family protein 0.06 Orthogroups_2024-Update
Glyma.08G025700 No alias Heat shock protein 70 (Hsp 70) family protein 0.05 Orthogroups_2024-Update
Glyma.11G140500 No alias heat shock protein 70 0.04 Orthogroups_2024-Update
Glyma.12G064000 No alias heat shock protein 70 0.05 Orthogroups_2024-Update
Glyma.15G059900 No alias mitochondrial HSO70 2 0.03 Orthogroups_2024-Update
Glyma.17G072400 No alias heat shock protein 70B 0.05 Orthogroups_2024-Update
Glyma.18G289100 No alias heat shock cognate protein 70-1 0.06 Orthogroups_2024-Update
Glyma.18G289600 No alias heat shock cognate protein 70-1 0.05 Orthogroups_2024-Update
Glyma.19G172200 No alias heat shock cognate protein 70-1 0.05 Orthogroups_2024-Update
HORVU1Hr1G030790.1 No alias chaperone *(cpHsc70)) 0.04 Orthogroups_2024-Update
HORVU4Hr1G012460.1 No alias chaperone HSCA of mitochondrial ISC system transfer... 0.02 Orthogroups_2024-Update
HORVU5Hr1G021300.3 No alias chaperone *(Hsp70) 0.03 Orthogroups_2024-Update
HORVU5Hr1G021310.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G008880.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G081460.2 No alias chaperone *(Hsp70) 0.03 Orthogroups_2024-Update
Kfl00416_0100 kfl00416_0100_v1.1 (q03684|bip4_tobac : 984.0) Luminal-binding protein 4... 0.03 Orthogroups_2024-Update
Kfl00430_0080 kfl00430_0080_v1.... (p09189|hsp7c_pethy : 1031.0) Heat shock cognate 70 kDa... 0.02 Orthogroups_2024-Update
Kfl00460_0030 kfl00460_0030_v1.1 (q02028|hsp7s_pea : 999.0) Stromal 70 kDa heat... 0.01 Orthogroups_2024-Update
LOC_Os01g62290 No alias DnaK family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g09770 No alias DnaK family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05760 No alias DnaK family protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g08350.1 No alias chaperone (Hsp70) 0.03 Orthogroups_2024-Update
Mp4g11410.1 No alias chaperone (Hsp70) 0.03 Orthogroups_2024-Update
Potri.001G087500 No alias Heat shock protein 70 (Hsp 70) family protein 0.06 Orthogroups_2024-Update
Potri.001G285500 No alias mitochondrial HSO70 2 0.05 Orthogroups_2024-Update
Potri.003G143600 No alias Heat shock protein 70 (Hsp 70) family protein 0.04 Orthogroups_2024-Update
Potri.008G054700 No alias heat shock cognate protein 70-1 0.03 Orthogroups_2024-Update
Potri.010G206600 No alias heat shock protein 70 0.04 Orthogroups_2024-Update
Pp1s153_153V6 No alias heat shock 0.02 Orthogroups_2024-Update
Pp1s181_3V6 No alias luminal binding protein 0.04 Orthogroups_2024-Update
Pp1s2_216V6 No alias heat shock protein 70 0.05 Orthogroups_2024-Update
Pp1s351_21V6 No alias heat shock protein 70 0.02 Orthogroups_2024-Update
Pp1s6_146V6 No alias heat shock 0.02 Orthogroups_2024-Update
Seita.1G117600.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.3G327900.1 No alias chaperone *(Hsp70) 0.03 Orthogroups_2024-Update
Sobic.001G129000.1 No alias chaperone *(cpHsc70)) 0.04 Orthogroups_2024-Update
Sobic.003G350700.1 No alias chaperone *(Hsp70) 0.04 Orthogroups_2024-Update
Sobic.004G011700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G163900.1 No alias chaperone *(Hsp70) 0.02 Orthogroups_2024-Update
Solyc03g082920 No alias Heat shock protein 70 (AHRD V3.3 *** Q9M4E8_CUCSA) 0.04 Orthogroups_2024-Update
Solyc04g011440 No alias ethylene-responsive heat shock protein cognate 70 0.05 Orthogroups_2024-Update
Solyc08g082820 No alias TOMBIPGRBC Tomato BiP (binding protein)/grp78 0.05 Orthogroups_2024-Update
Sopen03g022740 No alias Hsp70 protein 0.05 Orthogroups_2024-Update
Sopen06g032430 No alias Hsp70 protein 0.02 Orthogroups_2024-Update
Sopen08g031050 No alias Hsp70 protein 0.07 Orthogroups_2024-Update
Sopen10g035790 No alias Hsp70 protein 0.02 Orthogroups_2024-Update
Sopen11g025800 No alias Hsp70 protein 0.02 Orthogroups_2024-Update
evm.model.contig_2140.3 No alias (p09189|hsp7c_pethy : 883.0) Heat shock cognate 70 kDa... 0.03 Orthogroups_2024-Update
evm.model.contig_495.1 No alias (at4g24280 : 669.0) Involved in protein import into ... 0.02 Orthogroups_2024-Update
evm.model.tig00001368.4 No alias (q01899|hsp7m_phavu : 825.0) Heat shock 70 kDa protein,... 0.03 Orthogroups_2024-Update
evm.model.tig00020710.114 No alias (p09189|hsp7c_pethy : 787.0) Heat shock cognate 70 kDa... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 58 665
No external refs found!