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  5. PSME_00010932-RA

PSME_00010932-RA


Description : (at5g55860 : 99.8) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) & (original description: no original description)


Gene families : OG_42_0001671 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001671_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010932-RA
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Brara.C01279.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00007282-RA No alias (at3g58560 : 257.0) DNAse I-like superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00008224-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!