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  5. PSME_00010954-RA

PSME_00010954-RA


Description : (at5g65560 : 196.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 392.0) & (original description: no original description)


Gene families : OG_42_0006661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010954-RA
Cluster HCCA clusters: Cluster_413


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 293
IPR002885 Pentatricopeptide_repeat 487 532
IPR002885 Pentatricopeptide_repeat 554 601
IPR002885 Pentatricopeptide_repeat 8 56
IPR002885 Pentatricopeptide_repeat 192 228
IPR002885 Pentatricopeptide_repeat 378 427
IPR002885 Pentatricopeptide_repeat 453 481
No external refs found!