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  5. PSME_00011069-RA

PSME_00011069-RA


Description : (at1g71870 : 528.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10234 Blast hits to 10086 proteins in 1918 species: Archae - 185; Bacteria - 7350; Metazoa - 148; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 1056.0) & (original description: no original description)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011069-RA
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Bradi3g51590 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Brara.B01525.1 No alias metabolite transporter *(DTX) 0.05 Orthogroups_2024-Update
Brara.C01451.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Brara.E00679.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Glyma.01G132200 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.07G124600 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.16G198700 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G118820.2 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.9G348500.1 No alias metabolite transporter *(DTX) 0.05 Orthogroups_2024-Update
Sobic.001G019700.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sobic.004G283500.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 42 196
IPR002528 MATE_fam 229 390
No external refs found!