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  5. PSME_00011107-RA

PSME_00011107-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011107-RA
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.03 Orthogroups_2024-Update
Brara.A03156.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.I03370.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G048870.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
HORVU1Hr1G090250.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
HORVU2Hr1G037540.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
HORVU3Hr1G026970.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_9565296g0010 No alias (at1g01250 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00007051-RA No alias (at1g74930 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
Potri.001G069300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G101900 No alias redox responsive transcription factor 1 0.02 Orthogroups_2024-Update
Pp1s138_190V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Solyc04g007180 No alias No description available 0.02 Orthogroups_2024-Update
Sopen12g003310 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!