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PSME_00011179-RA


Description : (at2g41110 : 209.0) Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 2 (CAM2); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3). & (p04353|calm_spiol : 205.0) Calmodulin (CaM) - Spinacia oleracea (Spinach) & (reliability: 418.0) & (original description: no original description)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011179-RA
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G029107 No alias calmodulin 5 0.02 Orthogroups_2024-Update
MA_437839g0010 No alias (at5g21274 : 142.0) Encodes a calmodulin isoform.... 0.03 Orthogroups_2024-Update
PSME_00017958-RA No alias (at3g43810 : 236.0) EF hand domain protein encodes a... 0.03 Orthogroups_2024-Update
Potri.008G159300 No alias calmodulin-like 11 0.02 Orthogroups_2024-Update
Seita.9G097000.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 69 132
IPR002048 EF_hand_dom 12 61
No external refs found!