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  5. PSME_00011198-RA

PSME_00011198-RA


Description : (at1g70370 : 319.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (reliability: 638.0) & (original description: no original description)


Gene families : OG_42_0001780 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011198-RA
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
At1g60390 No alias Polygalacturonase 1 beta-like protein 2... 0.03 Orthogroups_2024-Update
PSME_00024493-RA No alias (at1g70370 : 272.0) polygalacturonase 2 (PG2); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00032046-RA No alias (at1g60390 : 380.0) polygalacturonase 1 (PG1); FUNCTIONS... 0.04 Orthogroups_2024-Update
Potri.008G190000 No alias polygalacturonase 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 396 514
No external refs found!