1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00011219-RA

PSME_00011219-RA


Description : (at1g16520 : 227.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 454.0) & (original description: no original description)


Gene families : OG_42_0001516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011219-RA
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
At1g16520 No alias At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50] 0.04 Orthogroups_2024-Update
Brara.A01978.1 No alias ER body formation factor *(NAIP) 0.04 Orthogroups_2024-Update
MA_136805g0010 No alias (at1g15740 : 220.0) Leucine-rich repeat family protein;... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!