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  5. PSME_00011678-RA

PSME_00011678-RA


Description : (at3g44540 : 266.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 4 (FAR4); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description)


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011678-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
A4A49_16197 No alias fatty acyl-coa reductase 3 0.04 Orthogroups_2024-Update
Bradi2g47121 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Bradi4g38460 No alias fatty acid reductase 4 0.04 Orthogroups_2024-Update
Brara.E02963.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01705.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00545.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G104650 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
Potri.009G144900 No alias Jojoba acyl CoA reductase-related male sterility protein 0.04 Orthogroups_2024-Update
Potri.019G075300 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Seita.2G306800.1 No alias fatty acyl CoA reductase *(FAR) 0.02 Orthogroups_2024-Update
Solyc11g067190 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** K4D9X6_SOLLC) 0.05 Orthogroups_2024-Update
Sopen06g030880 No alias Male sterility protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013120 Male_sterile_NAD-bd 8 154
IPR033640 FAR_C 238 324
No external refs found!