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Description : (at5g54290 : 179.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 358.0) & (original description: no original description)
Gene families : OG_42_0007501 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00011679-RA | |
| Cluster | HCCA clusters: Cluster_106 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| BP | GO:0017004 | cytochrome complex assembly | IEA | InterProScan predictions |
| BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Predicted GO |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
| BP | GO:0050658 | RNA transport | IEP | Predicted GO |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Predicted GO |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Predicted GO |
| BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| BP | GO:0051168 | nuclear export | IEP | Predicted GO |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003834 | Cyt_c_assmbl_TM_dom | 55 | 144 |
| No external refs found! |