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  5. PSME_00011751-RA

PSME_00011751-RA


Description : (at5g26960 : 161.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0005930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005930_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011751-RA
Cluster HCCA clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Brara.I00444.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 182 228
IPR006652 Kelch_1 231 284
IPR001810 F-box_dom 31 68
No external refs found!