PSME_00011757-RA

Description : (at4g30250 : 355.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 710.0) & (original description: no original description)

Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00011757-RA
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
59883	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
A4A49_03924	No alias	aaa-atpase	0.02	Orthogroups_2024-Update
A4A49_15221	No alias	protein hyper-sensitivity-related 4	0.03	Orthogroups_2024-Update
At4g05340	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Bradi1g54800	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Bradi2g44936	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Bradi4g30930	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
Glyma.09G241600	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Glyma.12G229000	No alias	cytochrome BC1 synthesis	0.02	Orthogroups_2024-Update
Glyma.19G018600	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Glyma.19G018700	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
HORVU7Hr1G098210.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os03g58790	No alias	ATPase, putative, expressed	0.02	Orthogroups_2024-Update
MA_16312g0010	No alias	(at5g40010 : 192.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
MA_230170g0010	No alias	(at3g28580 : 223.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update
MA_23842g0010	No alias	(at5g40010 : 366.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Potri.001G231200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Potri.008G177200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
Potri.015G067400	No alias	AAA-ATPase 1	0.02	Orthogroups_2024-Update
Pp1s108_16V6	No alias	atp binding	0.02	Orthogroups_2024-Update
Seita.2G070700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G333100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.3G124500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.5G218000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G067300.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.003G235300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc03g033840	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Sopen02g032300	No alias	Domain associated at C-terminal with AAA	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	31	123
IPR003959	ATPase_AAA_core	239	377

External Links

No external refs found!

PSME_00011757-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation