PSME_00011787-RA


Description : (at1g48110 : 346.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 692.0) & (original description: no original description)


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011787-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74560 No alias evolutionarily conserved C-terminal region 2 0.03 Orthogroups_2024-Update
Bradi3g06027 No alias evolutionarily conserved C-terminal region 8 0.02 Orthogroups_2024-Update
Brara.A03258.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Brara.E02771.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Brara.G02587.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
GRMZM2G330019 No alias evolutionarily conserved C-terminal region 2 0.02 Orthogroups_2024-Update
Glyma.15G136400 No alias evolutionarily conserved C-terminal region 7 0.04 Orthogroups_2024-Update
Glyma.17G038400 No alias evolutionarily conserved C-terminal region 7 0.03 Orthogroups_2024-Update
Kfl00036_0080 kfl00036_0080_v1.1 (at3g13060 : 152.0) evolutionarily conserved C-terminal... 0.01 Orthogroups_2024-Update
LOC_Os03g06240 No alias YT521-B-like family domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g51940 No alias YT521-B, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G223800 No alias evolutionarily conserved C-terminal region 11 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 351 492
No external refs found!