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  5. PSME_00011813-RA

PSME_00011813-RA


Description : (at5g57560 : 322.0) Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli; Touch 4 (TCH4); CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 2219 Blast hits to 2201 proteins in 305 species: Archae - 0; Bacteria - 284; Metazoa - 0; Fungi - 458; Plants - 1386; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (p35694|bru1_soybn : 312.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 606.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011813-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
119243 No alias xyloglucan endotransglucosylase/hydrolase 5 0.04 Orthogroups_2024-Update
140273 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
A4A49_04196 No alias xyloglucan endotransglucosylasehydrolase protein 9 0.03 Orthogroups_2024-Update
A4A49_19342 No alias xyloglucan endotransglucosylasehydrolase 2 0.03 Orthogroups_2024-Update
A4A49_21656 No alias xyloglucan endotransglucosylasehydrolase protein 24 0.03 Orthogroups_2024-Update
A4A49_21659 No alias xyloglucan endotransglucosylasehydrolase protein 22 0.03 Orthogroups_2024-Update
A4A49_36014 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.03 Orthogroups_2024-Update
AC210669.3_FG001 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.02 Orthogroups_2024-Update
At1g65310 No alias xyloglucan endotransglucosylase/hydrolase 17... 0.03 Orthogroups_2024-Update
At2g06850 No alias Xyloglucan endotransglucosylase/hydrolase protein 4... 0.03 Orthogroups_2024-Update
At2g36870 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
At4g14130 No alias Xyloglucan endotransglucosylase/hydrolase protein 15... 0.04 Orthogroups_2024-Update
At4g30280 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
At5g65730 No alias Xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Bradi1g33810 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.04 Orthogroups_2024-Update
Bradi1g33827 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Brara.A02345.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Brara.C01845.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Brara.E00809.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Brara.G00668.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Brara.H00699.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
GRMZM2G392125 No alias xyloglucan endotransglucosylase/hydrolase 24 0.03 Orthogroups_2024-Update
Glyma.02G068900 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Glyma.12G080100 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.12G197600 No alias xyloglucan endotransglucosylase/hydrolase 9 0.03 Orthogroups_2024-Update
Glyma.13G095200 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.17G065300 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G065400 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G157400 No alias xyloglucan endotransglucosylase/hydrolase 6 0.02 Orthogroups_2024-Update
Glyma.18G106500 No alias xyloglucan endotransglucosylase/hydrolase 15 0.03 Orthogroups_2024-Update
Glyma.18G165700 No alias xyloglucan endotransglucosylase/hydrolase 2 0.04 Orthogroups_2024-Update
Glyma.19G106700 No alias xyloglucan endotransglucosylase/hydrolase 5 0.04 Orthogroups_2024-Update
HORVU0Hr1G022110.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU2Hr1G108420.6 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G098320.3 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G098440.2 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
LOC_Os03g01800 No alias glycosyl hydrolases family 16, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g29750 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430695g0010 No alias (p35694|bru1_soybn : 327.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_10430703g0010 No alias (p35694|bru1_soybn : 343.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_10433908g0010 No alias (at4g03210 : 268.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
MA_11177g0010 No alias (at5g57550 : 312.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_11511g0010 No alias (at2g36870 : 354.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_328340g0010 No alias (at4g03210 : 285.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
MA_3306g0010 No alias (at5g65730 : 215.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_46026g0020 No alias (at4g03210 : 242.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
MA_848882g0010 No alias (at5g65730 : 338.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_894023g0010 No alias (at5g13870 : 233.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
MA_96657g0010 No alias (at5g57550 : 317.0) xyloglucan... 0.04 Orthogroups_2024-Update
Mp2g18360.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Orthogroups_2024-Update
Mp4g10000.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00028627-RA No alias (q41638|xtha_phaan : 479.0) Xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00031691-RA No alias (p35694|bru1_soybn : 332.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00035710-RA No alias (at2g36870 : 291.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00040364-RA No alias (at4g03210 : 145.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00045889-RA No alias (p35694|bru1_soybn : 350.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00047371-RA No alias (p35694|bru1_soybn : 289.0) Brassinosteroid-regulated... 0.06 Orthogroups_2024-Update
PSME_00047577-RA No alias (at4g03210 : 346.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00050857-RA No alias (q41638|xtha_phaan : 372.0) Xyloglucan... 0.04 Orthogroups_2024-Update
Potri.002G244200 No alias xyloglucan endotransglucosylase/hydrolase 2 0.04 Orthogroups_2024-Update
Potri.005G201200 No alias xyloglucan endotransglucosylase/hydrolase 15 0.04 Orthogroups_2024-Update
Potri.007G008500 No alias xyloglucan endotransglucosylase/hydrolase 6 0.04 Orthogroups_2024-Update
Potri.009G006600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Potri.018G095100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Pp1s193_16V6 No alias MAC12.33; xyloglucan endotransglycosylase (EXGT-A4)... 0.03 Orthogroups_2024-Update
Pp1s309_28V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s410_28V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
Seita.4G246400.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.8G142000.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Seita.9G337200.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Seita.9G573900.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Sobic.004G127200.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc03g093080 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g093110 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc03g093120 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc03g093130 No alias xyloglucan endotransglucosylase-hydrolase 3 0.03 Orthogroups_2024-Update
Solyc05g046290 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g006860 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc07g006870 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc07g055990 No alias Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1... 0.04 Orthogroups_2024-Update
Solyc07g056000 No alias xyloglycan endo-transglycosylase 0.02 Orthogroups_2024-Update
Solyc09g008320 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc09g092520 No alias xyloglucan endotransglycosylase 0.04 Orthogroups_2024-Update
Solyc12g007250 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen03g023900 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen03g023920 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen07g026530 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen07g029350 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen11g026010 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000757 GH16 31 209
IPR010713 XET_C 238 281
No external refs found!