Description : (at5g03760 : 850.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1700.0) & (original description: no original description)
Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00011823-RA | |
Cluster | HCCA clusters: Cluster_219 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
140200 | No alias | Cellulose-synthase-like C5 | 0.02 | Orthogroups_2024-Update | |
442658 | No alias | Cellulose-synthase-like C5 | 0.02 | Orthogroups_2024-Update | |
At4g13410 | No alias | Probable glucomannan 4-beta-mannosyltransferase 15... | 0.03 | Orthogroups_2024-Update | |
At5g16190 | No alias | cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190] | 0.04 | Orthogroups_2024-Update | |
Bradi3g36697 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.G00952.1 | No alias | EC_2.4 glycosyltransferase & mannan synthase *(CSLA) | 0.03 | Orthogroups_2024-Update | |
Brara.K01643.1 | No alias | 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase | 0.02 | Orthogroups_2024-Update | |
GRMZM2G020742 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.03G190200 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G150700 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G090000 | No alias | Cellulose-synthase-like C12 | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g03260 | No alias | CSLC10 - cellulose synthase-like family C, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10426467g0010 | No alias | (at5g03760 : 471.0) encodes a beta-mannan synthase that... | 0.07 | Orthogroups_2024-Update | |
MA_10429365g0010 | No alias | (at4g31590 : 729.0) encodes a gene similar to cellulose... | 0.04 | Orthogroups_2024-Update | |
PSME_00004636-RA | No alias | (at5g03760 : 500.0) encodes a beta-mannan synthase that... | 0.02 | Orthogroups_2024-Update | |
Pp1s162_130V6 | No alias | cellulose synthase-like glycosyltransferase family 2 | 0.02 | Orthogroups_2024-Update | |
Pp1s36_214V6 | No alias | cellulose synthase-like A3, glycosyltransferase family 2... | 0.02 | Orthogroups_2024-Update | |
Sobic.004G075900.1 | No alias | EC_2.4 glycosyltransferase & mannan synthase *(CSLA) | 0.03 | Orthogroups_2024-Update | |
Sobic.007G137400.1 | No alias | EC_2.4 glycosyltransferase & mannan synthase *(CSLA) | 0.04 | Orthogroups_2024-Update | |
Solyc11g066820 | No alias | Cellulose synthase-like protein (AHRD V3.3 *** L0ATP8_POPTO) | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
BP | GO:0016049 | cell growth | IEP | Predicted GO |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Predicted GO |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019900 | kinase binding | IEP | Predicted GO |
MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
BP | GO:0040007 | growth | IEP | Predicted GO |
BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001173 | Glyco_trans_2-like | 192 | 383 |
No external refs found! |