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  5. PSME_00011883-RA

PSME_00011883-RA


Description : (at4g27220 : 218.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011883-RA
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
407881 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
At1g15890 No alias Probable disease resistance protein At1g15890... 0.03 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Brara.I01920.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03376.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G032602 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G089020.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10062820g0010 No alias (at1g12280 : 143.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
MA_10427619g0010 No alias (at1g69550 : 114.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10435995g0040 No alias (at4g27190 : 188.0) NB-ARC domain-containing disease... 0.02 Orthogroups_2024-Update
MA_10436071g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_355252g0010 No alias (at4g26090 : 192.0) Encodes a plasma membrane protein... 0.03 Orthogroups_2024-Update
MA_451961g0010 No alias (at1g12280 : 177.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
MA_5225445g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_674039g0010 No alias (at5g63020 : 154.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
MA_8325275g0010 No alias (at1g12220 : 93.2) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
MA_8869735g0010 No alias (at1g61300 : 128.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
MA_9432601g0010 No alias (at5g63020 : 105.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00000174-RA No alias (at1g63350 : 147.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00004005-RA No alias (at1g15890 : 219.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00004922-RA No alias (at1g12280 : 266.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
PSME_00011110-RA No alias (at5g43740 : 165.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00016011-RA No alias (at5g05400 : 116.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00018989-RA No alias (at4g26090 : 240.0) Encodes a plasma membrane protein... 0.05 Orthogroups_2024-Update
PSME_00020046-RA No alias (at1g61180 : 156.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00027124-RA No alias (at4g10780 : 169.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00030472-RA No alias (at1g15890 : 234.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00033120-RA No alias (at1g63350 : 267.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00033628-RA No alias (at4g27220 : 254.0) NB-ARC domain-containing disease... 0.06 Orthogroups_2024-Update
PSME_00037442-RA No alias (at1g15890 : 222.0) Disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00040229-RA No alias (at1g12280 : 197.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00040940-RA No alias (at1g12220 : 181.0) Resistance gene, mediates resistance... 0.06 Orthogroups_2024-Update
PSME_00041797-RA No alias (at1g12280 : 246.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00045260-RA No alias (at1g12220 : 264.0) Resistance gene, mediates resistance... 0.06 Orthogroups_2024-Update
PSME_00045900-RA No alias (at1g12220 : 213.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00046780-RA No alias (at4g10780 : 218.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00048939-RA No alias (at1g15890 : 95.5) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00050940-RA No alias (at1g12280 : 221.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
PSME_00053148-RA No alias (at1g12210 : 218.0) RFL1 has high sequence similarity to... 0.04 Orthogroups_2024-Update
PSME_00056632-RA No alias (at1g61310 : 186.0) LRR and NB-ARC domains-containing... 0.01 Orthogroups_2024-Update
PSME_00056885-RA No alias (at4g27220 : 223.0) NB-ARC domain-containing disease... 0.06 Orthogroups_2024-Update
PSME_00057017-RA No alias (at1g12280 : 226.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00057068-RA No alias (at4g27220 : 250.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
Potri.019G002800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T013200 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T013900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T014700 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T026800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.7G164900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G321300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G435900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 171 388
IPR001611 Leu-rich_rpt 558 614
No external refs found!