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  5. PSME_00011980-RA

PSME_00011980-RA


Description : (p29449|trxh1_tobac : 92.8) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 90.5) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)


Gene families : OG_42_0000297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011980-RA

Target Alias Description ECC score Gene Family Method Actions
Cre12.g496700 No alias thioredoxin F-type 1 0.01 Orthogroups_2024-Update
GRMZM2G144653 No alias thioredoxin H-type 1 0.01 Orthogroups_2024-Update
Seita.4G008600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G057900.2 No alias protein-S-nitrosothiol reductase *(TRX5) & H-type... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 50 131
No external refs found!