1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00012000-RA

  1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00053636-RA

PSME_00053636-RA


Description : no hits & (original description: no original description)PSME_00012000-RA

Description : (p51108|dfra_maize : 262.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (at4g35420 : 252.0) Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production.; dihydroflavonol 4-reductase-like1 (DRL1); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: seed development, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G68540.1); Has 11019 Blast hits to 11006 proteins in 1795 species: Archae - 197; Bacteria - 4697; Metazoa - 293; Fungi - 927; Plants - 2536; Viruses - 49; Other Eukaryotes - 2320 (source: NCBI BLink). & (reliability: 504.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012000-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
At1g15950 No alias Cinnamoyl-CoA reductase 1... 0.03 Orthogroups_2024-Update
At5g42800 No alias Dihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15] 0.03 Orthogroups_2024-Update
Bradi2g01900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g13470 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36887 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
Brara.G03446.1 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
Glyma.08G320900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G369800 No alias cinnamoyl coa reductase 0.03 Orthogroups_2024-Update
Glyma.18G057900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G091300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G091500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G073800.2 No alias phaseic acid reductase *(CRL1/2) 0.04 Orthogroups_2024-Update
HORVU5Hr1G073950.4 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
HORVU5Hr1G122150.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g08500 No alias reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_647658g0010 No alias (p51110|dfra_vitvi : 461.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
Mp4g03990.1 No alias Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp5g13690.1 No alias Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00013651-RA No alias (at1g15950 : 419.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
PSME_00038843-RA No alias (at5g42800 : 216.0) dihydroflavonol reductase. Catalyzes... 0.03 Orthogroups_2024-Update
PSME_00041615-RA No alias (at1g15950 : 425.0) Encodes a cinnamoyl CoA reductase.... 0.04 Orthogroups_2024-Update
PSME_00046428-RA No alias (at1g15950 : 364.0) Encodes a cinnamoyl CoA reductase.... 0.05 Orthogroups_2024-Update
Potri.009G052000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G125400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Pp1s39_342V6 No alias cinnamoyl- reductase 0.02 Orthogroups_2024-Update
Seita.1G062400.1 No alias cinnamoyl-CoA reductase *(CCR) 0.04 Orthogroups_2024-Update
Seita.9G038000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00020537.37 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 25 250
No external refs found!