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  5. PSME_00012242-RA

PSME_00012242-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012242-RA
Cluster HCCA clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
PSME_00000199-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00002175-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00002881-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00003160-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00005539-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00006016-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00014612-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00020785-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00021943-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00022903-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043957-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00048403-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00049991-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00054799-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00055940-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!