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  5. PSME_00012293-RA

PSME_00012293-RA


Description : (o04887|pme2_citsi : 426.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at3g49220 : 409.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase PCR fragment F (TAIR:AT5G53370.1); Has 3279 Blast hits to 3212 proteins in 470 species: Archae - 6; Bacteria - 866; Metazoa - 1; Fungi - 193; Plants - 2188; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 818.0) & (original description: no original description)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012293-RA
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
A4A49_16804 No alias putative pectinesterasepectinesterase inhibitor 12 0.03 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.03 Orthogroups_2024-Update
At3g49220 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRM8] 0.03 Orthogroups_2024-Update
At4g02320 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V0A5] 0.05 Orthogroups_2024-Update
Bradi2g52140 No alias methylesterase PCR A 0.04 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.A02188.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.C02457.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.H01111.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G321870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.01G137700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.04G119100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.09G077100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.09G232100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434002g0010 No alias (at3g49220 : 399.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_10434031g0010 No alias (o04886|pme1_citsi : 471.0) Pectinesterase-1 precursor... 0.03 Orthogroups_2024-Update
MA_436039g0010 No alias (p83948|pme3_citsi : 486.0) Pectinesterase-3 precursor... 0.03 Orthogroups_2024-Update
PSME_00003000-RA No alias (at1g53830 : 495.0) encodes a pectin methylesterase;... 0.08 Orthogroups_2024-Update
PSME_00007922-RA No alias (at1g53830 : 539.0) encodes a pectin methylesterase;... 0.04 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.04 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.04 Orthogroups_2024-Update
PSME_00037746-RA No alias (at4g02330 : 473.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00054240-RA No alias (at4g02330 : 483.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Potri.001G162400 No alias pectin methylesterase 3 0.04 Orthogroups_2024-Update
Potri.003G021600 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.011G025400 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Potri.013G013400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.014G067100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.018G051400 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.T148300 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Pp1s149_288V6 No alias putative pectin esterase [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update
Pp1s258_34V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.04 Orthogroups_2024-Update
Seita.5G450500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.007G146300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.010G071300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 67 212
IPR000070 Pectinesterase_cat 266 553
No external refs found!