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  5. PSME_00012571-RA

PSME_00012571-RA


Description : (at3g54140 : 832.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (reliability: 1664.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012571-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
At1g72140 No alias Protein NRT1/ PTR FAMILY 5.12... 0.02 Orthogroups_2024-Update
Bradi2g43917 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Bradi3g28410 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Bradi5g01737 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Brara.B02002.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.G03101.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.I01914.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
GRMZM2G001764 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
GRMZM2G076313 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
GRMZM2G143998 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G005400 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.11G042000 No alias nitrate transporter 1.5 0.04 Orthogroups_2024-Update
Glyma.18G033700 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.05 Orthogroups_2024-Update
Glyma.18G300400 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G082300.3 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
HORVU4Hr1G064770.1 No alias anion transporter *(NRT1/PTR) 0.05 Orthogroups_2024-Update
LOC_Os01g37590 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g65200 No alias proton-dependent oligopeptide transport, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50930 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g40600 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
MA_10437108g0010 No alias (at3g53960 : 463.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
MA_10437216g0010 No alias (at3g54450 : 486.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
MA_37390g0010 No alias (at3g21670 : 492.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
Mp3g13790.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
PSME_00012939-RA No alias (at5g46050 : 614.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00017196-RA No alias (at5g01180 : 407.0) Encodes a dipeptide transporter... 0.06 Orthogroups_2024-Update
Potri.003G111500 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Seita.9G305600.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Seita.9G477400.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.006G201100.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sopen09g001330 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 105 536
No external refs found!