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  5. PSME_00012637-RA

PSME_00012637-RA


Description : (at1g69550 : 191.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012637-RA
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
PSME_00000640-RA No alias (at1g69550 : 142.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00022892-RA No alias (at1g69550 : 93.6) disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00025240-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00028282-RA No alias (at1g69550 : 219.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00038789-RA No alias (at1g69550 : 138.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 58 80
IPR001611 Leu-rich_rpt 131 153
No external refs found!