PSME_00012691-RA

Description : no hits & (original description: no original description)

Gene families : OG_42_0000282 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00012691-RA

Target	Alias	Description	ECC score	Gene Family Method
Glyma.16G178400	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G118210.7	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os03g02070	No alias	heavy-metal-associated domain-containing protein,...	0.02	Orthogroups_2024-Update
LOC_Os04g57200	No alias	heavy metal transport/detoxification protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g36200	No alias	heavy metal-associated domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g38870	No alias	heavy metal-associated domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_18139g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_867509g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00034352-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00034353-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Potri.002G032800	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G132200	No alias	Copper transport protein family	0.03	Orthogroups_2024-Update
Potri.014G089700	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G147000	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Seita.9G570800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0030001	metal ion transport	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Predicted GO
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006555	methionine metabolic process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
MF	GO:0008172	S-methyltransferase activity	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009086	methionine biosynthetic process	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	5	58

External Links

No external refs found!

PSME_00012691-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation