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  5. PSME_00012892-RA

PSME_00012892-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0005375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012892-RA
Cluster HCCA clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
PSME_00011719-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00018095-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00025444-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00048640-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00052304-RA No alias (q5ne24|nsp2_medtr : 135.0) Nodulation signaling pathway... 0.03 Orthogroups_2024-Update
PSME_00053882-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00054053-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR008546 DUF828 26 109
IPR008546 DUF828 114 225
No external refs found!