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  5. PSME_00013080-RA

PSME_00013080-RA


Description : (at5g33406 : 95.1) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013080-RA
Cluster HCCA clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Bradi2g40156 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.08G294500 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
LOC_Os02g30960 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g09570 No alias transposon protein, putative, Ac/Ds sub-class 0.02 Orthogroups_2024-Update
PSME_00031287-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00038048-RA No alias (at1g79740 : 164.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00041319-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00044994-RA No alias (at1g79740 : 87.0) hAT transposon superfamily; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00050173-RA No alias (at3g17450 : 133.0) hAT dimerisation domain-containing... 0.04 Orthogroups_2024-Update
PSME_00052875-RA No alias (at1g79740 : 130.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00057200-RA No alias (at5g33406 : 93.6) hAT dimerisation domain-containing... 0.02 Orthogroups_2024-Update
Solyc07g009120 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 152 222
No external refs found!