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  5. PSME_00013115-RA

PSME_00013115-RA


Description : (p31110|tlp_orysa : 205.0) Thaumatin-like protein precursor - Oryza sativa (Rice) & (at4g11650 : 152.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0002839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013115-RA
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Bradi3g07960 No alias osmotin 34 0.03 Orthogroups_2024-Update
PSME_00034789-RA No alias (p31110|tlp_orysa : 226.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00037737-RA No alias (p31110|tlp_orysa : 215.0) Thaumatin-like protein... 0.05 Orthogroups_2024-Update
PSME_00037959-RA No alias (p31110|tlp_orysa : 207.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00055391-RA No alias (p31110|tlp_orysa : 204.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
Sobic.008G182300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G182600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G182700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 37 157
No external refs found!