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  5. PSME_00013242-RA

PSME_00013242-RA


Description : (q8w013|comt1_catro : 208.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g35160 : 206.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013242-RA

Target Alias Description ECC score Gene Family Method Actions
At1g33030 No alias At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0] 0.03 Orthogroups_2024-Update
Bradi1g47030 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Brara.F03756.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Cre03.g148800 No alias O-methyltransferase family protein 0.01 Orthogroups_2024-Update
Glyma.06G295700 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.18G267500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G110170.3 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
HORVU6Hr1G000040.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.02 Orthogroups_2024-Update
HORVU6Hr1G090510.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Kfl00158_0170 kfl00158_0170_v1.... (at5g54160 : 162.0) A caffeic acid/5-hydroxyferulic acid... 0.02 Orthogroups_2024-Update
LOC_Os12g25870 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426470g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_165197g0010 No alias (q8w013|comt1_catro : 372.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_9153751g0010 No alias (q8w013|comt1_catro : 164.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00002256-RA No alias (q9fqy8|comt1_capan : 417.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.04 Orthogroups_2024-Update
Solyc06g064510 No alias O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) 0.03 Orthogroups_2024-Update
Sopen01g053940 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen06g034820 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 61 275
No external refs found!