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  5. PSME_00013270-RA

PSME_00013270-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013270-RA
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G122500 No alias terpene synthase 03 0.04 Orthogroups_2024-Update
Glyma.12G102000 No alias terpene synthase-like sequence-1,8-cineole 0.04 Orthogroups_2024-Update
MA_17608g0020 No alias (at4g16740 : 180.0) Encodes an (E,E)-alpha-farnesene... 0.04 Orthogroups_2024-Update
MA_1830g0010 No alias (p59287|cass_ricco : 269.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00002286-RA No alias (p59287|cass_ricco : 243.0) Casbene synthase,... 0.02 Orthogroups_2024-Update
PSME_00008408-RA No alias (at4g02780 : 401.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
PSME_00030201-RA No alias (at4g02780 : 365.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
PSME_00034521-RA No alias (p93665|dcs1_goshi : 185.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.02 Orthogroups_2024-Update
Potri.019G022900 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Potri.T001000 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Sopen01g048290 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 26 105
No external refs found!