1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00013442-RA

PSME_00013442-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0002280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013442-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
PSME_00005771-RA No alias (at1g24090 : 99.8) RNase H family protein; FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
PSME_00006193-RA No alias (at1g24090 : 100.0) RNase H family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00008241-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00017604-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00019214-RA No alias (at3g09510 : 84.3) Ribonuclease H-like superfamily... 0.01 Orthogroups_2024-Update
PSME_00019861-RA No alias (at1g24090 : 97.1) RNase H family protein; FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
PSME_00025732-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00039013-RA No alias (at5g51080 : 98.6) RNase H family protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00049931-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 144 210
No external refs found!