PSME_00013462-RA

Description : (at2g04160 : 530.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1060.0) & (original description: no original description)

Gene families : OG_42_0000006 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00013462-RA
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
412516	No alias	Subtilisin-like serine endopeptidase family protein	0.04	Orthogroups_2024-Update
415194	No alias	Subtilisin-like serine endopeptidase family protein	0.04	Orthogroups_2024-Update
A4A49_12868	No alias	co(2)-response secreted protease	0.02	Orthogroups_2024-Update
A4A49_16696	No alias	subtilisin-like protease sbt1.4	0.02	Orthogroups_2024-Update
A4A49_27979	No alias	subtilisin-like protease sbt1.9	0.02	Orthogroups_2024-Update
A4A49_41141	No alias	subtilisin-like protease sbt1.4	0.03	Orthogroups_2024-Update
At4g10520	No alias	Subtilisin-like protease SBT3.9...	0.03	Orthogroups_2024-Update
At5g59090	No alias	Subtilisin-like protease SBT4.12...	0.03	Orthogroups_2024-Update
Bradi2g48740	No alias	subtilase family protein	0.03	Orthogroups_2024-Update
Bradi3g57140	No alias	Subtilase family protein	0.04	Orthogroups_2024-Update
Bradi5g10210	No alias	Subtilase family protein	0.03	Orthogroups_2024-Update
Brara.A01195.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Glyma.05G152200	No alias	Subtilisin-like serine endopeptidase family protein	0.03	Orthogroups_2024-Update
HORVU4Hr1G013170.1	No alias	protease *(SBT1)	0.03	Orthogroups_2024-Update
LOC_Os03g06290	No alias	OsSub27 - Putative Subtilisin homologue, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g55350	No alias	OsSub31 - Putative Subtilisin homologue, expressed	0.03	Orthogroups_2024-Update
MA_10436904g0010	No alias	(at1g20160 : 369.0) ATSBT5.2; FUNCTIONS IN: identical...	0.03	Orthogroups_2024-Update
MA_734639g0010	No alias	(at5g67360 : 728.0) Encodes a subtilisin-like serine...	0.05	Orthogroups_2024-Update
MA_87560g0010	No alias	(at1g32940 : 474.0) SBT3.5; FUNCTIONS IN: identical...	0.02	Orthogroups_2024-Update
MA_9616058g0010	No alias	(at5g67360 : 310.0) Encodes a subtilisin-like serine...	0.03	Orthogroups_2024-Update
Potri.001G167300	No alias	Subtilase family protein	0.03	Orthogroups_2024-Update
Potri.005G145300	No alias	Subtilase family protein	0.02	Orthogroups_2024-Update
Potri.006G001600	No alias	Subtilase family protein	0.02	Orthogroups_2024-Update
Potri.010G196901	No alias	Subtilisin-like serine endopeptidase family protein	0.04	Orthogroups_2024-Update
Seita.4G211700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G347200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G170700.1	No alias	protease *(SBT1)	0.04	Orthogroups_2024-Update
Sobic.002G065300.1	No alias	protease *(SBT4)	0.03	Orthogroups_2024-Update
Sobic.002G274000.1	No alias	protease *(SBT3)	0.03	Orthogroups_2024-Update
Solyc01g087740	No alias	Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC)	0.04	Orthogroups_2024-Update
Solyc10g085510	No alias	Ubiquitin-conjugating enzyme family protein (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen12g006500	No alias	Subtilase family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	InterProScan predictions
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Predicted GO
BP	GO:0006862	nucleotide transport	IEP	Predicted GO
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Predicted GO
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015301	anion:anion antiporter activity	IEP	Predicted GO
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015748	organophosphate ester transport	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0099516	ion antiporter activity	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000209	Peptidase_S8/S53_dom	27	417

External Links

No external refs found!

PSME_00013462-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation