1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00013552-RA

PSME_00013552-RA


Description : (at1g08080 : 278.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description)


Gene families : OG_42_0000267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013552-RA
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_02271 No alias alpha carbonic anhydrase 1, chloroplastic 0.03 Orthogroups_2024-Update
At1g08065 No alias Alpha carbonic anhydrase 5... 0.02 Orthogroups_2024-Update
GRMZM2G087259 No alias alpha carbonic anhydrase 7 0.03 Orthogroups_2024-Update
GRMZM5G807267 No alias alpha carbonic anhydrase 1 0.03 Orthogroups_2024-Update
Glyma.10G073400 No alias alpha carbonic anhydrase 7 0.02 Orthogroups_2024-Update
Glyma.13G146100 No alias alpha carbonic anhydrase 7 0.02 Orthogroups_2024-Update
Glyma.19G185900 No alias alpha carbonic anhydrase 7 0.03 Orthogroups_2024-Update
Mp6g14480.1 No alias Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00007376-RA No alias (at1g08080 : 286.0) alpha carbonic anhydrase 7 (ACA7);... 0.04 Orthogroups_2024-Update
PSME_00008265-RA No alias (at5g56330 : 138.0) alpha carbonic anhydrase 8 (ACA8);... 0.04 Orthogroups_2024-Update
PSME_00013553-RA No alias (at1g08080 : 163.0) alpha carbonic anhydrase 7 (ACA7);... 0.06 Orthogroups_2024-Update
PSME_00031001-RA No alias (at4g20990 : 144.0) alpha carbonic anhydrase 4 (ACA4);... 0.03 Orthogroups_2024-Update
PSME_00042101-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Seita.6G179900.1 No alias alpha-type carbonic anhydrase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Sobic.007G155000.1 No alias EC_4.2 carbon-oxygen lyase & alpha-type carbonic anhydrase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001148 CA_dom 35 263
No external refs found!