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  5. PSME_00013605-RA

PSME_00013605-RA


Description : (at2g23910 : 108.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (p51108|dfra_maize : 86.3) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 216.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013605-RA
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
A4A49_64584 No alias dihydroflavonol-4-reductase 0.03 Orthogroups_2024-Update
At1g09510 No alias At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57] 0.02 Orthogroups_2024-Update
At1g25460 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.03 Orthogroups_2024-Update
At5g42800 No alias Dihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15] 0.05 Orthogroups_2024-Update
Bradi2g44480 No alias dihydroflavonol 4-reductase 0.02 Orthogroups_2024-Update
Bradi4g33907 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Brara.D02044.1 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
Brara.G03446.1 No alias phaseic acid reductase *(CRL1/2) 0.04 Orthogroups_2024-Update
Brara.J01234.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G026930 No alias dihydroflavonol 4-reductase 0.04 Orthogroups_2024-Update
GRMZM2G468439 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G218100 No alias cinnamoyl coa reductase 1 0.02 Orthogroups_2024-Update
HORVU4Hr1G085100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g31514 No alias dihydroflavonol-4-reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426788g0020 No alias (at1g15950 : 369.0) Encodes a cinnamoyl CoA reductase.... 0.04 Orthogroups_2024-Update
MA_137109g0010 No alias (at1g15950 : 414.0) Encodes a cinnamoyl CoA reductase.... 0.04 Orthogroups_2024-Update
MA_4112g0010 No alias (at1g80820 : 247.0) Encodes an cinnamoyl CoA reductase... 0.03 Orthogroups_2024-Update
MA_46269g0010 No alias (at1g68540 : 427.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_629320g0010 No alias (at1g15950 : 273.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
MA_647658g0010 No alias (p51110|dfra_vitvi : 461.0) Dihydroflavonol-4-reductase... 0.05 Orthogroups_2024-Update
PSME_00028440-RA No alias (at1g15950 : 421.0) Encodes a cinnamoyl CoA reductase.... 0.05 Orthogroups_2024-Update
PSME_00041615-RA No alias (at1g15950 : 425.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
Potri.002G004500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G257700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Pp1s144_153V6 No alias dihydroflavanoid reductase-like1 0.01 Orthogroups_2024-Update
Sobic.002G146000.1 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
Sobic.002G249900.1 No alias phaseic acid reductase *(CRL1/2) 0.02 Orthogroups_2024-Update
Sobic.002G250000.4 No alias phaseic acid reductase *(CRL1/2) 0.02 Orthogroups_2024-Update
Sobic.007G141200.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Sobic.010G066000.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Sopen02g029720 No alias NAD dependent epimerase/dehydratase family 0.02 Orthogroups_2024-Update
Sopen06g025690 No alias NAD dependent epimerase/dehydratase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 19 142
No external refs found!