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  5. PSME_00013651-RA

PSME_00013651-RA


Description : (at1g15950 : 419.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51110|dfra_vitvi : 207.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 838.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013651-RA

Target Alias Description ECC score Gene Family Method Actions
227659 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
A4A49_27764 No alias dihydroflavonol-4-reductase 0.03 Orthogroups_2024-Update
Bradi2g01900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g54950 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
Brara.B03104.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I05270.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G013726 No alias dihydroflavonol 4-reductase 0.04 Orthogroups_2024-Update
GRMZM2G468439 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G057900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G073740.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g03670 No alias dihydroflavonol-4-reductase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g44260 No alias dihydroflavonol-4-reductase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010647-RA No alias (p51108|dfra_maize : 211.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
PSME_00012000-RA No alias (p51108|dfra_maize : 262.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
Potri.001G045800 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
Potri.001G256400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G052000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G037800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G088200.1 No alias tetraketide alpha-pyrone reductase *(TKPR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 7 245
No external refs found!