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  5. PSME_00013652-RA

PSME_00013652-RA


Description : (at1g15950 : 420.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51110|dfra_vitvi : 208.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 840.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013652-RA
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At1g15950 No alias Cinnamoyl-CoA reductase 1... 0.01 Orthogroups_2024-Update
At2g33590 No alias CRL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE7] 0.01 Orthogroups_2024-Update
Brara.G03446.1 No alias phaseic acid reductase *(CRL1/2) 0.02 Orthogroups_2024-Update
Glyma.11G164700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G018500 No alias dihydroflavonol 4-reductase-like1 0.01 Orthogroups_2024-Update
MA_137109g0010 No alias (at1g15950 : 414.0) Encodes a cinnamoyl CoA reductase.... 0.02 Orthogroups_2024-Update
PSME_00013977-RA No alias (p51110|dfra_vitvi : 453.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
Seita.4G212200.1 No alias phaseic acid reductase *(CRL1/2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 7 245
No external refs found!