PSME_00013901-RA

Description : (at5g06050 : 196.0) Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)

Gene families : OG_42_0002795 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002795_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00013901-RA
Cluster	HCCA clusters: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00031346-RA	No alias	(at1g44910 : 83.6) Binds the carboxyl-terminal domain...	0.02	Orthogroups_2024-Update
Potri.001G289800	No alias	pre-mRNA-processing protein 40A	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004159	Put_SAM_MeTrfase	103	222

External Links

No external refs found!

PSME_00013901-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation