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  5. PSME_00013948-RA

PSME_00013948-RA


Description : (at3g11980 : 481.0) Similar to fatty acid reductases.; MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (q06398|gstu6_orysa : 177.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 962.0) & (original description: no original description)


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013948-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_36364 No alias fatty acyl-coa reductase 2 0.03 Orthogroups_2024-Update
At3g11980 No alias Fatty acyl-CoA reductase [Source:UniProtKB/TrEMBL;Acc:A0A178VDD9] 0.05 Orthogroups_2024-Update
At5g22420 No alias Putative fatty acyl-CoA reductase 7... 0.02 Orthogroups_2024-Update
Bradi4g37856 No alias fatty acid reductase 1 0.01 Orthogroups_2024-Update
Glyma.11G185100 No alias Jojoba acyl CoA reductase-related male sterility protein 0.02 Orthogroups_2024-Update
LOC_Os04g28620 No alias male sterility protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00022027-RA No alias (at3g11980 : 358.0) Similar to fatty acid reductases.;... 0.01 Orthogroups_2024-Update
PSME_00032396-RA No alias (at3g11980 : 84.7) Similar to fatty acid reductases.;... 0.02 Orthogroups_2024-Update
PSME_00032397-RA No alias (at3g11980 : 100.0) Similar to fatty acid reductases.;... 0.04 Orthogroups_2024-Update
Potri.009G144900 No alias Jojoba acyl CoA reductase-related male sterility protein 0.01 Orthogroups_2024-Update
Seita.2G132800.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Seita.6G098600.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Sobic.007G169900.1 No alias fatty acyl CoA reductase *(FAR) 0.01 Orthogroups_2024-Update
Solyc01g104200 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** M1C6Z8_SOLTU) 0.03 Orthogroups_2024-Update
Solyc09g005940 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** K4CQ84_SOLLC) 0.02 Orthogroups_2024-Update
Sopen03g011410 No alias Male sterility protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033640 FAR_C 1023 1097
IPR004045 Glutathione_S-Trfase_N 92 168
IPR013120 Male_sterile_NAD-bd 628 943
No external refs found!