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  5. PSME_00013952-RA

PSME_00013952-RA


Description : (at2g26580 : 167.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q7xim7|yab1_orysa : 140.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 334.0) & (original description: no original description)


Gene families : OG_42_0000538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013952-RA
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At2g45190 No alias Axial regulator YABBY 1 [Source:UniProtKB/Swiss-Prot;Acc:O22152] 0.03 Orthogroups_2024-Update
Brara.D02729.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
Brara.G02853.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
MA_112273g0010 No alias (at1g08465 : 173.0) Member of the YABBY family of... 0.05 Orthogroups_2024-Update
MA_407206g0010 No alias (at1g08465 : 142.0) Member of the YABBY family of... 0.03 Orthogroups_2024-Update
Potri.016G067300 No alias Plant-specific transcription factor YABBY family protein 0.02 Orthogroups_2024-Update
Potri.018G129800 No alias plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Sobic.001G199200.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
Solyc12g009580 No alias CRABS CLAW 5b 0.04 Orthogroups_2024-Update
Sopen12g004560 No alias YABBY protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006780 YABBY 10 159
No external refs found!