1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00013977-RA

PSME_00013977-RA


Description : (p51110|dfra_vitvi : 453.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 444.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013977-RA
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G107076 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G131836 No alias cinnamoyl coa reductase 1 0.02 Orthogroups_2024-Update
Glyma.12G019800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os08g34280 No alias cinnamoyl-CoA reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_79460g0010 No alias (p51104|dfra_diaca : 457.0) Dihydroflavonol-4-reductase... 0.04 Orthogroups_2024-Update
Mp2g00170.1 No alias Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.03 Orthogroups_2024-Update
Mp4g03990.1 No alias Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
PSME_00013652-RA No alias (at1g15950 : 420.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
Seita.4G048300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G163400.1 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
Seita.9G038000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g085020 No alias dihydroflavonol 4-reductase 0.04 Orthogroups_2024-Update
Sopen02g029720 No alias NAD dependent epimerase/dehydratase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 31 273
No external refs found!