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  5. PSME_00014066-RA

PSME_00014066-RA


Description : (at1g24290 : 299.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA+ ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)


Gene families : OG_42_0009429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014066-RA
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Brara.G00864.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_90280g0010 No alias (at1g24290 : 300.0) AAA-type ATPase family protein;... 0.08 Orthogroups_2024-Update
Pp1s16_272V6 No alias werner helicase interacting protein 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021886 MgsA_C 565 715
IPR032423 AAA_assoc_2 527 564
IPR003959 ATPase_AAA_core 244 350
No external refs found!