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  5. PSME_00014147-RA

PSME_00014147-RA


Description : (at3g07880 : 193.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 386.0) & (original description: no original description)


Gene families : OG_42_0001037 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014147-RA
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Pp1s198_106V6 No alias rho gdp-dissociation inhibitor 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000406 Rho_GDI 6 163
No external refs found!