Description : (at4g17610 : 154.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)
Gene families : OG_42_0002741 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002741_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g01110 | No alias | RNA methyltransferase, TrmH family protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
PSME_00034996-RA | No alias | (at4g17610 : 139.0) tRNA/rRNA methyltransferase (SpoU)... | 0.02 | Orthogroups_2024-Update | |
PSME_00039184-RA | No alias | (at4g17610 : 161.0) tRNA/rRNA methyltransferase (SpoU)... | 0.02 | Orthogroups_2024-Update | |
PSME_00040368-RA | No alias | (at4g17610 : 160.0) tRNA/rRNA methyltransferase (SpoU)... | 0.02 | Orthogroups_2024-Update | |
PSME_00046842-RA | No alias | (at4g17610 : 151.0) tRNA/rRNA methyltransferase (SpoU)... | 0.01 | Orthogroups_2024-Update | |
PSME_00053381-RA | No alias | (at4g17610 : 158.0) tRNA/rRNA methyltransferase (SpoU)... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
BP | GO:0006396 | RNA processing | IEA | InterProScan predictions |
MF | GO:0008173 | RNA methyltransferase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001537 | SpoU_MeTrfase | 54 | 140 |
No external refs found! |