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  5. PSME_00014270-RA

PSME_00014270-RA


Description : (at1g04710 : 97.8) EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink). & (reliability: 195.6) & (original description: no original description)


Gene families : OG_42_0015202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0015202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014270-RA
Cluster HCCA clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
Mp8g02580.1 No alias 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Mp8g02610.1 No alias 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!