1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00014458-RA

PSME_00014458-RA


Description : (q5kqn0|cax2_orysa : 133.0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger 2) (OsCAX2) - Oryza sativa (Rice) & (at1g55730 : 114.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)


Gene families : OG_42_0000685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000685_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014458-RA
Cluster HCCA clusters: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
A4A49_41582 No alias vacuolar cationproton exchanger 3 0.01 Orthogroups_2024-Update
At3g51860 No alias Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9] 0.03 Orthogroups_2024-Update
Glyma.03G058500 No alias cation exchanger 3 0.02 Orthogroups_2024-Update
Glyma.08G337000 No alias cation exchanger 5 0.05 Orthogroups_2024-Update
Glyma.11G178700 No alias cation exchanger 3 0.01 Orthogroups_2024-Update
MA_12452g0010 No alias (at3g51860 : 404.0) cation exchanger 3 (CAX3); CONTAINS... 0.01 Orthogroups_2024-Update
MA_40197g0010 No alias (q6k1c4|cax3_orysa : 342.0) Vacuolar cation/proton... 0.03 Orthogroups_2024-Update
Potri.011G166900 No alias cation exchanger 2 0.02 Orthogroups_2024-Update
Sobic.006G245100.1 No alias cation antiporter *(CAX) 0.03 Orthogroups_2024-Update
Sopen12g006440 No alias Sodium/calcium exchanger protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 123 204
No external refs found!