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  5. PSME_00014560-RA

PSME_00014560-RA


Description : (at1g34060 : 142.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)


Gene families : OG_42_0003099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014560-RA
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G181135 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006947 EGF_alliinase 10 58
IPR006948 Alliinase_C 110 284
No external refs found!