1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00014743-RA

PSME_00014743-RA


Description : (at3g05940 : 210.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description)


Gene families : OG_42_0002916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002916_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014743-RA
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Bradi1g53490 No alias Protein of unknown function (DUF300) 0.03 Orthogroups_2024-Update
Cre12.g502400 No alias Protein of unknown function (DUF300) 0.02 Orthogroups_2024-Update
Mp2g18300.1 No alias Protein LAZ1 homolog 2 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005178 Ostalpha/TMEM184C 56 93
No external refs found!