PSME_00014750-RA


Description : (at3g53510 : 743.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G37360.1); Has 392871 Blast hits to 356829 proteins in 4146 species: Archae - 6979; Bacteria - 312762; Metazoa - 8946; Fungi - 6247; Plants - 5690; Viruses - 12; Other Eukaryotes - 52235 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 179.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1486.0) & (original description: no original description)


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014750-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
84236 No alias ABC-2 type transporter family protein 0.04 Orthogroups_2024-Update
A4A49_25880 No alias abc transporter g family member 6 0.03 Orthogroups_2024-Update
At3g55090 No alias ABC transporter G family member 16... 0.04 Orthogroups_2024-Update
At3g55130 No alias ABC transporter G family member 19... 0.03 Orthogroups_2024-Update
At5g13580 No alias ABC transporter G family member 6... 0.03 Orthogroups_2024-Update
Brara.D00427.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.04 Orthogroups_2024-Update
HORVU4Hr1G058070.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
MA_10432886g0010 No alias (at2g37360 : 717.0) ABC-2 type transporter family... 0.09 Orthogroups_2024-Update
Seita.3G042300.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
Seita.3G042600.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 144 296
IPR013525 ABC_2_trans 468 676
No external refs found!